Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015841028.1_cds_XP_016507826.1_20913
CDS Infomation

[gene=LOC107825481] [db_xref=GeneID:107825481] [protein=calcium-dependent protein kinase 28-like isoform X1] [protein_id=XP_016507826.1] [location=join(3664..4092,5071..5201,5315..5356,5473..5584,5658..5736,5924..6093,6664..6790,7138..7253,7353..7460,7627..7689,8079..8429)] [gbkey=CDS]
Sequence

ATGGGTAATAACTGTTTTTCCAGCTCAAAAGTTAGTGGTTCTAACAGCAACACCCCCTCC
ACCACCACCACCACCGTGAATGTCCGGATGAACACAGCCAATCCACCTTCTACATCCACA
ATTACATCAACAAAACAAGAAGGGTCTCATTGCAATAAACAGAAAGTTAAAGATAACCAC
AGAAGCCAACACCAAAAACAACAACCTAGAAATTCTCAGCAAAATGTTAAGAAGCACAAT
AATGGGAGGAGGCAGAAGAGTGGGGTTATTCCTTGTGGGAAAAGAACAGATTTTGGGTTT
GATAAAGATTTTGATAAGAGGTTTACCATTGGCAAGTTGTTGGGTCATGGCCAATTTGGT
TACACCTACGTTGCCACCCACAAGTCTAATGGTGATCGCGTCGCTGTCAAGAGAATTGAG
AAGAACAAGATGGTTCTTCCGATTGCAGTTGAGGATGTAAAACGAGAAGTCAAGATATTG
AAGGCCTTATCCGGTCATGAGAATGTGGTTCAATTCAATAATGCATTTGAGGATGATAAC
TATGTCTACATAGTAATGGAGTTATGTGAGGGTGGAGAACTCTTGGACCGCATTTTGGCC
AAAAAGGACAGCCATTATGCCGAGAAAGATGCAGCAATAGTTGTACGTCAGATGCTAAAA
GTTGCGGCTCAATGTCATTTACATGGTTTGGTGCATCGTGATATGAAACCTGAGAATTTT
CTCTTTAAATCTCCAAAGGAGGATTCACCATTGAAGGCCACAGATTTTGGTCTTTCAGAC
TTCATAAGACCAGGGAAGAAGTTCCAAGATATTGTTGGCAGTGCATATTACGTAGCGCCA
GAGGTATTAAAGCGTAGATCAGGACCCGAATCAGATGTGTGGAGCATTGGTGTTATTACA
TACATTTTGCTCTGTGGCCGTCGGCCCTTCTGGGATAAAACAGAGGATGGCATATTCAAG
GAGGTACTAAGAAACAAGCCTGATTTTCGTCGTAAGCCATGGCCAACTATAAGCAACAGT
GCTAAAGATTTTGTTAAGAAATTGTTGGTGAAGGATCCTCGTGCTAGACTTACTGCTGCC
CAGGCCCTATCTCATCCATGGGTTCGCGAAGGAGGTGATGCATCTGAGATTCCACTGGAC
ATCTCCGTCTTATCCAACATGCGACAATTTGTCAAATACAGTCGATTAAAACAGTTTGCT
TTACGGGCATTGGCTAGCACAGTTGATGAGGAGGAACTGGCAGATGTCCGGGATCAGTTT
TCTGCAATTGATGTGGATAAAAATGGTGTCATTAGCCTTGAAGAAATGAGACAGGCCCTT
GCTAAGGATCTTCCCTGGAAGATGAAAGAGTCACGGGTTCTTGAGATTCTTCAAGCGATT
GATAGTAACACAGATGGGCTAGTTGATTTCCCGGAGTTTGTCGCAGCCACTTTACATGTC
CACCAGTTGGAGGAGCATAATTCTACAAAATGGCAGGAAAGATCGCAAGCTGCTTTTGAG
AAATTTGATGTTGATAGAGATGGATTCATAACTCCGGAAGAACTTAGAATGGTTAGTATG
TCATATTTTCTACTTCAAGTGGTTAACAATGTGGTATTCCGATGCTTCTTCCAAAAGAAA
AAGGCGAGAAGAAAAGAAATAAGAGTTGCTAAGCTACATGGTTATACTGTACTTATTAAG
CACATAAATCTTTCATTGATCTTTGAAAGTGTGGATCCTCCATATTGA

Peptide Sequence

PEP ID

XP_016507826.1
PEP Infomation

PREDICTED: calcium-dependent protein kinase 28-like isoform X1 [Nicotiana tabacum]
Sequence

MGNNCFSSSKVSGSNSNTPSTTTTTVNVRMNTANPPSTSTITSTKQEGSHCNKQKVKDNH
RSQHQKQQPRNSQQNVKKHNNGRRQKSGVIPCGKRTDFGFDKDFDKRFTIGKLLGHGQFG
YTYVATHKSNGDRVAVKRIEKNKMVLPIAVEDVKREVKILKALSGHENVVQFNNAFEDDN
YVYIVMELCEGGELLDRILAKKDSHYAEKDAAIVVRQMLKVAAQCHLHGLVHRDMKPENF
LFKSPKEDSPLKATDFGLSDFIRPGKKFQDIVGSAYYVAPEVLKRRSGPESDVWSIGVIT
YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPTISNSAKDFVKKLLVKDPRARLTAA
QALSHPWVREGGDASEIPLDISVLSNMRQFVKYSRLKQFALRALASTVDEEELADVRDQF
SAIDVDKNGVISLEEMRQALAKDLPWKMKESRVLEILQAIDSNTDGLVDFPEFVAATLHV
HQLEEHNSTKWQERSQAAFEKFDVDRDGFITPEELRMVSMSYFLLQVVNNVVFRCFFQKK
KARRKEIRVAKLHGYTVLIKHINLSLIFESVDPPY

Transcript Sequence

Gene sequence data has not been registered.